Welcome to PartSegCore-compiled-backend’s documentation!

The PartSegCore-compiled-backend was created as package for PartSeg project. It contains parts of code that needs to be compiled. It was created to simplify maintenance of PartSeg project. But maybe you could find here useful functions.

Contents:

• PartSegCore_compiled_backend.calc_bounds
  • calc_bounds()
  • calc_bounds2()
  • calc_bounds3()
  • calc_bounds4()
  • calc_bounds5()
• PartSegCore_compiled_backend.fast_unique
  • label_unique()
• PartSegCore_compiled_backend.napari_mapping
  • map_array_parallel()
  • map_array_sequential()
  • zero_preserving_modulo_parallel()
  • zero_preserving_modulo_sequential()
• PartSegCore_compiled_backend.sprawl_utils.find_split
  • euclidean_sprawl()
  • fdt_sprawl()
  • path_maximum_sprawl()
  • path_minimum_sprawl()
  • sprawl_component()

Indices and tables

• Index

• Module Index

• Search Page

Cite as

Bokota, G., Sroka, J., Basu, S. et al. PartSeg: a tool for quantitative feature extraction from 3D microscopy images for dummies. BMC Bioinformatics 22, 72 (2021). https://doi.org/10.1186/s12859-021-03984-1